Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.5□□□□□ -0.41
Snx27Q3UHD6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.5□□□□□ -0.41
Snx27Q3UHD6 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm13422-201ENSMUST00000118834 504 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm15744-201ENSMUST00000161734 213 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Mir6407-201ENSMUST00000184510 101 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Snx27Q3UHD6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm25148-201ENSMUST00000104611 123 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm8111-201ENSMUST00000117659 987 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm15528-201ENSMUST00000117821 864 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Mir7051-201ENSMUST00000184167 73 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm28324-201ENSMUST00000187913 264 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm5100-201ENSMUST00000195631 589 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Gm45856-201ENSMUST00000212752 416 ntBASIC12.48□□□□□ -0.41
Snx27Q3UHD6 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Snx27Q3UHD6 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms