Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Ccr4P51680 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm11509-201ENSMUST00000117358 325 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm15711-201ENSMUST00000118889 535 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm28937-201ENSMUST00000185413 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm29400-201ENSMUST00000187208 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm28662-201ENSMUST00000188446 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm28251-201ENSMUST00000188835 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm37318-201ENSMUST00000194325 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm38017-201ENSMUST00000194768 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm37287-201ENSMUST00000195449 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Gm37793-201ENSMUST00000195548 695 ntBASIC10.7□□□□□ -0.7
Ccr4P51680 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ccr4P51680 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ccr4P51680 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Ccr4P51680 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.69□□□□□ -0.7
Ccr4P51680 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.69□□□□□ -0.7
Ccr4P51680 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Gm8343-201ENSMUST00000182705 994 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.69□□□□□ -0.7
Ccr4P51680 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Gm18038-201ENSMUST00000197900 485 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Gm43002-201ENSMUST00000200310 155 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Ccr4P51680 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Ccr4P51680 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.69□□□□□ -0.7
Ccr4P51680 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Ccr4P51680 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Ccr4P51680 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ccr4P51680 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms