Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Gm3839S4R1W1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3839S4R1W1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3839S4R1W1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.24■□□□□ 0.51
Gm3839S4R1W1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Gm3839S4R1W1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.23■□□□□ 0.51
Gm3839S4R1W1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3839S4R1W1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3839S4R1W1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.22■□□□□ 0.51
Gm3839S4R1W1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3839S4R1W1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3839S4R1W1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Gm3839S4R1W1 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Gm3839S4R1W1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Gm3839S4R1W1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
Gm3839S4R1W1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Gm3839S4R1W1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Gm3839S4R1W1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Gm3839S4R1W1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Gm3839S4R1W1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3839S4R1W1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3839S4R1W1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Gm3839S4R1W1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3839S4R1W1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3839S4R1W1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gm3839S4R1W1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.16■□□□□ 0.5
Gm3839S4R1W1 Gm7143-201ENSMUST00000222811 859 ntBASIC18.16■□□□□ 0.5
Gm3839S4R1W1 Gm9870-201ENSMUST00000063874 645 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms