Protein–RNA interactions for Protein: Q9Z2A0

Pdpk1, 3-phosphoinositide-dependent protein kinase 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1Q9Z2A0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdpk1Q9Z2A0 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.66■□□□□ 0.9
Pdpk1Q9Z2A0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pdpk1Q9Z2A0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pdpk1Q9Z2A0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pdpk1Q9Z2A0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdpk1Q9Z2A0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pdpk1Q9Z2A0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pdpk1Q9Z2A0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pdpk1Q9Z2A0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.64■□□□□ 0.89
Pdpk1Q9Z2A0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Pdpk1Q9Z2A0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pdpk1Q9Z2A0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pdpk1Q9Z2A0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pdpk1Q9Z2A0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pdpk1Q9Z2A0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pdpk1Q9Z2A0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pdpk1Q9Z2A0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pdpk1Q9Z2A0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pdpk1Q9Z2A0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.58■□□□□ 0.89
Pdpk1Q9Z2A0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pdpk1Q9Z2A0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pdpk1Q9Z2A0 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.58■□□□□ 0.88
Pdpk1Q9Z2A0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pdpk1Q9Z2A0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pdpk1Q9Z2A0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pdpk1Q9Z2A0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdpk1Q9Z2A0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.57■□□□□ 0.88
Pdpk1Q9Z2A0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
Pdpk1Q9Z2A0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pdpk1Q9Z2A0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdpk1Q9Z2A0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.55■□□□□ 0.88
Pdpk1Q9Z2A0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdpk1Q9Z2A0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdpk1Q9Z2A0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdpk1Q9Z2A0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.55■□□□□ 0.88
Pdpk1Q9Z2A0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pdpk1Q9Z2A0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pdpk1Q9Z2A0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms