Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ap4s1Q9WVL1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.58■□□□□ 0.73
Ap4s1Q9WVL1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ap4s1Q9WVL1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.58■□□□□ 0.73
Ap4s1Q9WVL1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ap4s1Q9WVL1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ap4s1Q9WVL1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ap4s1Q9WVL1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ap4s1Q9WVL1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ap4s1Q9WVL1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ap4s1Q9WVL1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ap4s1Q9WVL1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.56■□□□□ 0.72
Ap4s1Q9WVL1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ap4s1Q9WVL1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ap4s1Q9WVL1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ap4s1Q9WVL1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ap4s1Q9WVL1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ap4s1Q9WVL1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ap4s1Q9WVL1 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.53■□□□□ 0.72
Ap4s1Q9WVL1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ap4s1Q9WVL1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ap4s1Q9WVL1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ap4s1Q9WVL1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.52■□□□□ 0.72
Ap4s1Q9WVL1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ap4s1Q9WVL1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ap4s1Q9WVL1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ap4s1Q9WVL1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.52■□□□□ 0.72
Ap4s1Q9WVL1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.52■□□□□ 0.71
Ap4s1Q9WVL1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ap4s1Q9WVL1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ap4s1Q9WVL1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ap4s1Q9WVL1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ap4s1Q9WVL1 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ap4s1Q9WVL1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.5■□□□□ 0.71
Ap4s1Q9WVL1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ap4s1Q9WVL1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ap4s1Q9WVL1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ap4s1Q9WVL1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ap4s1Q9WVL1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ap4s1Q9WVL1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms