Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ClcnkaQ9WUB7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ClcnkaQ9WUB7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
ClcnkaQ9WUB7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ClcnkaQ9WUB7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ClcnkaQ9WUB7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.76■□□□□ 0.59
ClcnkaQ9WUB7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.76■□□□□ 0.59
ClcnkaQ9WUB7 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.76■□□□□ 0.59
ClcnkaQ9WUB7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClcnkaQ9WUB7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClcnkaQ9WUB7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ClcnkaQ9WUB7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ClcnkaQ9WUB7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClcnkaQ9WUB7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClcnkaQ9WUB7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ClcnkaQ9WUB7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClcnkaQ9WUB7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ClcnkaQ9WUB7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ClcnkaQ9WUB7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClcnkaQ9WUB7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.73■□□□□ 0.59
ClcnkaQ9WUB7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.73■□□□□ 0.59
ClcnkaQ9WUB7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClcnkaQ9WUB7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClcnkaQ9WUB7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ClcnkaQ9WUB7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClcnkaQ9WUB7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.72■□□□□ 0.59
ClcnkaQ9WUB7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ClcnkaQ9WUB7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ClcnkaQ9WUB7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ClcnkaQ9WUB7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.72■□□□□ 0.59
ClcnkaQ9WUB7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Etf1-202ENSMUST00000180351 108 ntBASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ClcnkaQ9WUB7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Gm9959-201ENSMUST00000068277 390 ntBASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClcnkaQ9WUB7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Gm7417-201ENSMUST00000192950 473 ntBASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClcnkaQ9WUB7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.68■□□□□ 0.58
ClcnkaQ9WUB7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.67■□□□□ 0.58
ClcnkaQ9WUB7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClcnkaQ9WUB7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.67■□□□□ 0.58
ClcnkaQ9WUB7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ClcnkaQ9WUB7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ClcnkaQ9WUB7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClcnkaQ9WUB7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms