Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atp6ap1Q9R1Q9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Atp6ap1Q9R1Q9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Atp6ap1Q9R1Q9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atp6ap1Q9R1Q9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20■□□□□ 0.79
Atp6ap1Q9R1Q9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Atp6ap1Q9R1Q9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Atp6ap1Q9R1Q9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atp6ap1Q9R1Q9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atp6ap1Q9R1Q9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atp6ap1Q9R1Q9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atp6ap1Q9R1Q9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atp6ap1Q9R1Q9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.99■□□□□ 0.79
Atp6ap1Q9R1Q9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Atp6ap1Q9R1Q9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.97■□□□□ 0.79
Atp6ap1Q9R1Q9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atp6ap1Q9R1Q9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atp6ap1Q9R1Q9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atp6ap1Q9R1Q9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atp6ap1Q9R1Q9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atp6ap1Q9R1Q9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atp6ap1Q9R1Q9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atp6ap1Q9R1Q9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atp6ap1Q9R1Q9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atp6ap1Q9R1Q9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.93■□□□□ 0.78
Atp6ap1Q9R1Q9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.93■□□□□ 0.78
Atp6ap1Q9R1Q9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atp6ap1Q9R1Q9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Atp6ap1Q9R1Q9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Atp6ap1Q9R1Q9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atp6ap1Q9R1Q9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atp6ap1Q9R1Q9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Atp6ap1Q9R1Q9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
Atp6ap1Q9R1Q9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atp6ap1Q9R1Q9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atp6ap1Q9R1Q9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atp6ap1Q9R1Q9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atp6ap1Q9R1Q9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atp6ap1Q9R1Q9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atp6ap1Q9R1Q9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.89■□□□□ 0.77
Atp6ap1Q9R1Q9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.89■□□□□ 0.77
Atp6ap1Q9R1Q9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atp6ap1Q9R1Q9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atp6ap1Q9R1Q9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atp6ap1Q9R1Q9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Atp6ap1Q9R1Q9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms