Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.92■□□□□ 0.62
Trim39Q9ESN2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim39Q9ESN2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim39Q9ESN2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim39Q9ESN2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim39Q9ESN2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim39Q9ESN2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim39Q9ESN2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim39Q9ESN2 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim39Q9ESN2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Trim39Q9ESN2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim39Q9ESN2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim39Q9ESN2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
Trim39Q9ESN2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trim39Q9ESN2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim39Q9ESN2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim39Q9ESN2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim39Q9ESN2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Trim39Q9ESN2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim39Q9ESN2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim39Q9ESN2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim39Q9ESN2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim39Q9ESN2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim39Q9ESN2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trim39Q9ESN2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim39Q9ESN2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim39Q9ESN2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim39Q9ESN2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim39Q9ESN2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim39Q9ESN2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim39Q9ESN2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim39Q9ESN2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim39Q9ESN2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim39Q9ESN2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim39Q9ESN2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms