Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtl8cQ9D6I0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rtl8cQ9D6I0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtl8cQ9D6I0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtl8cQ9D6I0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtl8cQ9D6I0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rtl8cQ9D6I0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.25■□□□□ 0.51
Rtl8cQ9D6I0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtl8cQ9D6I0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtl8cQ9D6I0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtl8cQ9D6I0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 Gm5812-201ENSMUST00000061073 957 ntBASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtl8cQ9D6I0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtl8cQ9D6I0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Gm7143-201ENSMUST00000222811 859 ntBASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtl8cQ9D6I0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rtl8cQ9D6I0 Gm15546-201ENSMUST00000122095 826 ntBASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl8cQ9D6I0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl8cQ9D6I0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rtl8cQ9D6I0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rtl8cQ9D6I0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl8cQ9D6I0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl8cQ9D6I0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl8cQ9D6I0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl8cQ9D6I0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Gm15820-201ENSMUST00000201566 728 ntBASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl8cQ9D6I0 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.16■□□□□ 0.5
Rtl8cQ9D6I0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms