Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Snrnp48Q9D361 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Snrnp48Q9D361 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Snrnp48Q9D361 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Snrnp48Q9D361 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Snrnp48Q9D361 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.4■□□□□ 0.86
Snrnp48Q9D361 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Snrnp48Q9D361 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Snrnp48Q9D361 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snrnp48Q9D361 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snrnp48Q9D361 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snrnp48Q9D361 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snrnp48Q9D361 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snrnp48Q9D361 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Snrnp48Q9D361 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.39■□□□□ 0.86
Snrnp48Q9D361 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snrnp48Q9D361 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Snrnp48Q9D361 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
Snrnp48Q9D361 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snrnp48Q9D361 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snrnp48Q9D361 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Snrnp48Q9D361 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Snrnp48Q9D361 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Snrnp48Q9D361 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.37■□□□□ 0.85
Snrnp48Q9D361 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Snrnp48Q9D361 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.36■□□□□ 0.85
Snrnp48Q9D361 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.36■□□□□ 0.85
Snrnp48Q9D361 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp48Q9D361 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Snrnp48Q9D361 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Snrnp48Q9D361 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp48Q9D361 Gm14117-201ENSMUST00000122417 843 ntBASIC20.35■□□□□ 0.85
Snrnp48Q9D361 Gm22238-201ENSMUST00000175222 88 ntBASIC20.35■□□□□ 0.85
Snrnp48Q9D361 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Snrnp48Q9D361 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Snrnp48Q9D361 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp48Q9D361 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp48Q9D361 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.33■□□□□ 0.85
Snrnp48Q9D361 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp48Q9D361 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.33■□□□□ 0.85
Snrnp48Q9D361 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Snrnp48Q9D361 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Snrnp48Q9D361 Gm9870-201ENSMUST00000063874 645 ntBASIC20.33■□□□□ 0.85
Snrnp48Q9D361 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.33■□□□□ 0.84
Snrnp48Q9D361 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snrnp48Q9D361 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Snrnp48Q9D361 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp48Q9D361 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp48Q9D361 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp48Q9D361 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.32■□□□□ 0.84
Snrnp48Q9D361 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.32■□□□□ 0.84
Snrnp48Q9D361 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp48Q9D361 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Snrnp48Q9D361 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Snrnp48Q9D361 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.31■□□□□ 0.84
Snrnp48Q9D361 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms