Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps33aQ9D2N9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33aQ9D2N9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.68■■□□□ 1.06
Vps33aQ9D2N9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33aQ9D2N9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33aQ9D2N9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Vps33aQ9D2N9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33aQ9D2N9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps33aQ9D2N9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps33aQ9D2N9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps33aQ9D2N9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps33aQ9D2N9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vps33aQ9D2N9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vps33aQ9D2N9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Vps33aQ9D2N9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps33aQ9D2N9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps33aQ9D2N9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps33aQ9D2N9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps33aQ9D2N9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Vps33aQ9D2N9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Vps33aQ9D2N9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Vps33aQ9D2N9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps33aQ9D2N9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.61■■□□□ 1.05
Vps33aQ9D2N9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps33aQ9D2N9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps33aQ9D2N9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Vps33aQ9D2N9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33aQ9D2N9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33aQ9D2N9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33aQ9D2N9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.58■■□□□ 1.05
Vps33aQ9D2N9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps33aQ9D2N9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Vps33aQ9D2N9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms