Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vmp1Q99KU0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vmp1Q99KU0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vmp1Q99KU0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vmp1Q99KU0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Gm9959-201ENSMUST00000068277 390 ntBASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Vmp1Q99KU0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Gm45102-201ENSMUST00000207427 857 ntBASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Vmp1Q99KU0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmp1Q99KU0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Gm10399-202ENSMUST00000202768 748 ntBASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Vmp1Q99KU0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Gm14117-201ENSMUST00000122417 843 ntBASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Etf1-202ENSMUST00000180351 108 ntBASIC19.54■□□□□ 0.72
Vmp1Q99KU0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmp1Q99KU0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vmp1Q99KU0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vmp1Q99KU0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmp1Q99KU0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmp1Q99KU0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Vmp1Q99KU0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vmp1Q99KU0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Vmp1Q99KU0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vmp1Q99KU0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Vmp1Q99KU0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vmp1Q99KU0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vmp1Q99KU0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vmp1Q99KU0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vmp1Q99KU0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.52■□□□□ 0.71
Vmp1Q99KU0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.51■□□□□ 0.71
Vmp1Q99KU0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.51■□□□□ 0.71
Vmp1Q99KU0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.51■□□□□ 0.71
Vmp1Q99KU0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.51■□□□□ 0.71
Vmp1Q99KU0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Vmp1Q99KU0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmp1Q99KU0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Vmp1Q99KU0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vmp1Q99KU0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmp1Q99KU0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Gm40881-201ENSMUST00000223397 166 ntBASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vmp1Q99KU0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms