Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha8Q91Y12 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.86■□□□□ 0.77
Pcdha8Q91Y12 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdha8Q91Y12 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.86■□□□□ 0.77
Pcdha8Q91Y12 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Gm40881-201ENSMUST00000223397 166 ntBASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha8Q91Y12 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha8Q91Y12 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha8Q91Y12 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha8Q91Y12 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdha8Q91Y12 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha8Q91Y12 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha8Q91Y12 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha8Q91Y12 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha8Q91Y12 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha8Q91Y12 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha8Q91Y12 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha8Q91Y12 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha8Q91Y12 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha8Q91Y12 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdha8Q91Y12 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha8Q91Y12 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha8Q91Y12 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha8Q91Y12 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Pcdha8Q91Y12 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha8Q91Y12 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.78■□□□□ 0.76
Pcdha8Q91Y12 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha8Q91Y12 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdha8Q91Y12 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Pcdha8Q91Y12 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha8Q91Y12 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha8Q91Y12 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha8Q91Y12 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha8Q91Y12 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha8Q91Y12 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha8Q91Y12 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha8Q91Y12 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdha8Q91Y12 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdha8Q91Y12 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdha8Q91Y12 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdha8Q91Y12 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdha8Q91Y12 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms