Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgc5Q91XW9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
Pcdhgc5Q91XW9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.29■■□□□ 1.32
Pcdhgc5Q91XW9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Pcdhgc5Q91XW9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgc5Q91XW9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdhgc5Q91XW9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Pcdhgc5Q91XW9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhgc5Q91XW9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhgc5Q91XW9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Mir7075-201ENSMUST00000184187 82 ntBASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhgc5Q91XW9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Gm9870-201ENSMUST00000063874 645 ntBASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhgc5Q91XW9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhgc5Q91XW9 Gm10616-201ENSMUST00000205285 2127 ntBASIC23.23■■□□□ 1.31
Pcdhgc5Q91XW9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgc5Q91XW9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgc5Q91XW9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.23■■□□□ 1.31
Pcdhgc5Q91XW9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.23■■□□□ 1.31
Pcdhgc5Q91XW9 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.23■■□□□ 1.31
Pcdhgc5Q91XW9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhgc5Q91XW9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 Iqck-206ENSMUST00000208658 2891 ntBASIC23.22■■□□□ 1.31
Pcdhgc5Q91XW9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhgc5Q91XW9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgc5Q91XW9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgc5Q91XW9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhgc5Q91XW9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgc5Q91XW9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgc5Q91XW9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhgc5Q91XW9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgc5Q91XW9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgc5Q91XW9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgc5Q91XW9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgc5Q91XW9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhgc5Q91XW9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhgc5Q91XW9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhgc5Q91XW9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.17■■□□□ 1.3
Pcdhgc5Q91XW9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms