Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22■■□□□ 1.11
Lmcd1Q8VEE1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22■■□□□ 1.11
Lmcd1Q8VEE1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22■■□□□ 1.11
Lmcd1Q8VEE1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lmcd1Q8VEE1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lmcd1Q8VEE1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lmcd1Q8VEE1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Lmcd1Q8VEE1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Gm10653-202ENSMUST00000139570 835 ntBASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Gm22240-201ENSMUST00000175225 82 ntBASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lmcd1Q8VEE1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 Gm10252-201ENSMUST00000209541 832 ntBASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lmcd1Q8VEE1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lmcd1Q8VEE1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Gm11421-201ENSMUST00000122124 294 ntBASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Gm20760-201ENSMUST00000179197 648 ntBASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Lmcd1Q8VEE1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.91■■□□□ 1.1
Lmcd1Q8VEE1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.91■■□□□ 1.1
Lmcd1Q8VEE1 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.91■■□□□ 1.1
Lmcd1Q8VEE1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lmcd1Q8VEE1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Lmcd1Q8VEE1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Lmcd1Q8VEE1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.9■■□□□ 1.1
Lmcd1Q8VEE1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.9■■□□□ 1.1
Lmcd1Q8VEE1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.9■■□□□ 1.1
Lmcd1Q8VEE1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.89■■□□□ 1.09
Lmcd1Q8VEE1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
Lmcd1Q8VEE1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lmcd1Q8VEE1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lmcd1Q8VEE1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Lmcd1Q8VEE1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lmcd1Q8VEE1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms