Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf8Q8VC56 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf8Q8VC56 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.57■□□□□ 0.72
Rnf8Q8VC56 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf8Q8VC56 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf8Q8VC56 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf8Q8VC56 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf8Q8VC56 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf8Q8VC56 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf8Q8VC56 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf8Q8VC56 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf8Q8VC56 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf8Q8VC56 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf8Q8VC56 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Gm15820-201ENSMUST00000201566 728 ntBASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf8Q8VC56 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf8Q8VC56 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf8Q8VC56 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.52■□□□□ 0.72
Rnf8Q8VC56 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf8Q8VC56 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf8Q8VC56 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
Rnf8Q8VC56 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf8Q8VC56 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.52■□□□□ 0.71
Rnf8Q8VC56 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf8Q8VC56 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf8Q8VC56 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf8Q8VC56 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.5■□□□□ 0.71
Rnf8Q8VC56 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf8Q8VC56 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf8Q8VC56 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf8Q8VC56 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf8Q8VC56 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.48■□□□□ 0.71
Rnf8Q8VC56 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf8Q8VC56 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rnf8Q8VC56 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf8Q8VC56 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Rnf8Q8VC56 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.47■□□□□ 0.71
Rnf8Q8VC56 Iqck-206ENSMUST00000208658 2891 ntBASIC19.47■□□□□ 0.71
Rnf8Q8VC56 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf8Q8VC56 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf8Q8VC56 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf8Q8VC56 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf8Q8VC56 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf8Q8VC56 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf8Q8VC56 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms