Protein–RNA interactions for Protein: Q8VBZ3

Clptm1, Cleft lip and palate transmembrane protein 1 homolog, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clptm1Q8VBZ3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.76■□□□□ 0.91
Clptm1Q8VBZ3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clptm1Q8VBZ3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clptm1Q8VBZ3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Clptm1Q8VBZ3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clptm1Q8VBZ3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clptm1Q8VBZ3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clptm1Q8VBZ3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clptm1Q8VBZ3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clptm1Q8VBZ3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.75■□□□□ 0.91
Clptm1Q8VBZ3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Clptm1Q8VBZ3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clptm1Q8VBZ3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clptm1Q8VBZ3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clptm1Q8VBZ3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clptm1Q8VBZ3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clptm1Q8VBZ3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clptm1Q8VBZ3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clptm1Q8VBZ3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clptm1Q8VBZ3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clptm1Q8VBZ3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Clptm1Q8VBZ3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clptm1Q8VBZ3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clptm1Q8VBZ3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clptm1Q8VBZ3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clptm1Q8VBZ3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clptm1Q8VBZ3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.66■□□□□ 0.9
Clptm1Q8VBZ3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clptm1Q8VBZ3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clptm1Q8VBZ3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms