Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3kbp1Q8R550 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Gm12821-201ENSMUST00000120022 600 ntBASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sh3kbp1Q8R550 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3kbp1Q8R550 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3kbp1Q8R550 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sh3kbp1Q8R550 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sh3kbp1Q8R550 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sh3kbp1Q8R550 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3kbp1Q8R550 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3kbp1Q8R550 Gm45417-201ENSMUST00000209533 758 ntBASIC20.99■□□□□ 0.95
Sh3kbp1Q8R550 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3kbp1Q8R550 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sh3kbp1Q8R550 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sh3kbp1Q8R550 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sh3kbp1Q8R550 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sh3kbp1Q8R550 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sh3kbp1Q8R550 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3kbp1Q8R550 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.94■□□□□ 0.94
Sh3kbp1Q8R550 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3kbp1Q8R550 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3kbp1Q8R550 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sh3kbp1Q8R550 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 Serp2-204ENSMUST00000228055 705 ntBASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sh3kbp1Q8R550 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3kbp1Q8R550 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3kbp1Q8R550 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3kbp1Q8R550 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3kbp1Q8R550 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms