Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Ubqln1Q8R317 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubqln1Q8R317 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubqln1Q8R317 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ubqln1Q8R317 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.32■□□□□ 0.68
Ubqln1Q8R317 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ubqln1Q8R317 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubqln1Q8R317 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Gm9959-201ENSMUST00000068277 390 ntBASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubqln1Q8R317 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubqln1Q8R317 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubqln1Q8R317 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubqln1Q8R317 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubqln1Q8R317 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubqln1Q8R317 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubqln1Q8R317 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ubqln1Q8R317 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ubqln1Q8R317 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubqln1Q8R317 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ubqln1Q8R317 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ubqln1Q8R317 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubqln1Q8R317 Gm15039-201ENSMUST00000118914 875 ntBASIC19.27■□□□□ 0.68
Ubqln1Q8R317 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ubqln1Q8R317 Gm45102-201ENSMUST00000207427 857 ntBASIC19.27■□□□□ 0.68
Ubqln1Q8R317 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubqln1Q8R317 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ubqln1Q8R317 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ubqln1Q8R317 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.27■□□□□ 0.67
Ubqln1Q8R317 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ubqln1Q8R317 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubqln1Q8R317 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ubqln1Q8R317 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubqln1Q8R317 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.26■□□□□ 0.67
Ubqln1Q8R317 Rps24-207ENSMUST00000224568 714 ntBASIC19.26■□□□□ 0.67
Ubqln1Q8R317 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubqln1Q8R317 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
Ubqln1Q8R317 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubqln1Q8R317 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubqln1Q8R317 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubqln1Q8R317 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ubqln1Q8R317 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubqln1Q8R317 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ubqln1Q8R317 Gm7143-201ENSMUST00000222811 859 ntBASIC19.22■□□□□ 0.67
Ubqln1Q8R317 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubqln1Q8R317 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ubqln1Q8R317 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.22■□□□□ 0.67
Ubqln1Q8R317 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms