Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.19■□□□□ 0.82
Alms1Q8K4E0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Alms1Q8K4E0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Alms1Q8K4E0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.19■□□□□ 0.82
Alms1Q8K4E0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Alms1Q8K4E0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Alms1Q8K4E0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Alms1Q8K4E0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Alms1Q8K4E0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alms1Q8K4E0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Alms1Q8K4E0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alms1Q8K4E0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alms1Q8K4E0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Alms1Q8K4E0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Alms1Q8K4E0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Alms1Q8K4E0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Alms1Q8K4E0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alms1Q8K4E0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Alms1Q8K4E0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alms1Q8K4E0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Alms1Q8K4E0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Alms1Q8K4E0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Alms1Q8K4E0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Alms1Q8K4E0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Alms1Q8K4E0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.15■□□□□ 0.82
Alms1Q8K4E0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Alms1Q8K4E0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Alms1Q8K4E0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.15■□□□□ 0.82
Alms1Q8K4E0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.15■□□□□ 0.82
Alms1Q8K4E0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Alms1Q8K4E0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Alms1Q8K4E0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.14■□□□□ 0.81
Alms1Q8K4E0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Gm10493-201ENSMUST00000097270 612 ntBASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Alms1Q8K4E0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alms1Q8K4E0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alms1Q8K4E0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alms1Q8K4E0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alms1Q8K4E0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Alms1Q8K4E0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.12■□□□□ 0.81
Alms1Q8K4E0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Alms1Q8K4E0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alms1Q8K4E0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.1■□□□□ 0.81
Alms1Q8K4E0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alms1Q8K4E0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Alms1Q8K4E0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Alms1Q8K4E0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Alms1Q8K4E0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Alms1Q8K4E0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Alms1Q8K4E0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Alms1Q8K4E0 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.08■□□□□ 0.8
Alms1Q8K4E0 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.08■□□□□ 0.8
Alms1Q8K4E0 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.08■□□□□ 0.8
Alms1Q8K4E0 Spcs1-204ENSMUST00000226782 949 ntBASIC20.08■□□□□ 0.8
Alms1Q8K4E0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Alms1Q8K4E0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Alms1Q8K4E0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Alms1Q8K4E0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms