Protein–RNA interactions for Protein: Q8CJ61

Cmtm4, CKLF-like MARVEL transmembrane domain-containing protein 4, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmtm4Q8CJ61 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cmtm4Q8CJ61 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cmtm4Q8CJ61 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.58■□□□□ 0.41
Cmtm4Q8CJ61 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cmtm4Q8CJ61 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cmtm4Q8CJ61 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cmtm4Q8CJ61 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cmtm4Q8CJ61 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cmtm4Q8CJ61 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cmtm4Q8CJ61 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Cmtm4Q8CJ61 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cmtm4Q8CJ61 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cmtm4Q8CJ61 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cmtm4Q8CJ61 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cmtm4Q8CJ61 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cmtm4Q8CJ61 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cmtm4Q8CJ61 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Cmtm4Q8CJ61 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cmtm4Q8CJ61 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cmtm4Q8CJ61 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cmtm4Q8CJ61 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cmtm4Q8CJ61 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.52■□□□□ 0.4
Cmtm4Q8CJ61 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cmtm4Q8CJ61 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Cmtm4Q8CJ61 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cmtm4Q8CJ61 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cmtm4Q8CJ61 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cmtm4Q8CJ61 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.51■□□□□ 0.39
Cmtm4Q8CJ61 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cmtm4Q8CJ61 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cmtm4Q8CJ61 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cmtm4Q8CJ61 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.5■□□□□ 0.39
Cmtm4Q8CJ61 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cmtm4Q8CJ61 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cmtm4Q8CJ61 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms