Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpm6Q8CIR4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.7■□□□□ 0.9
Trpm6Q8CIR4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trpm6Q8CIR4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trpm6Q8CIR4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trpm6Q8CIR4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm6Q8CIR4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm6Q8CIR4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.69■□□□□ 0.9
Trpm6Q8CIR4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Trpm6Q8CIR4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trpm6Q8CIR4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.69■□□□□ 0.9
Trpm6Q8CIR4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Gm26833-201ENSMUST00000180899 440 ntBASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.68■□□□□ 0.9
Trpm6Q8CIR4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trpm6Q8CIR4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Gm26571-201ENSMUST00000181399 666 ntBASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trpm6Q8CIR4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm6Q8CIR4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trpm6Q8CIR4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trpm6Q8CIR4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trpm6Q8CIR4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.64■□□□□ 0.9
Trpm6Q8CIR4 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.64■□□□□ 0.9
Trpm6Q8CIR4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm6Q8CIR4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm6Q8CIR4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm6Q8CIR4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm6Q8CIR4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trpm6Q8CIR4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.64■□□□□ 0.89
Trpm6Q8CIR4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trpm6Q8CIR4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.62■□□□□ 0.89
Trpm6Q8CIR4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trpm6Q8CIR4 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.62■□□□□ 0.89
Trpm6Q8CIR4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.62■□□□□ 0.89
Trpm6Q8CIR4 Gm5874-201ENSMUST00000096101 508 ntBASIC20.62■□□□□ 0.89
Trpm6Q8CIR4 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Gm10493-201ENSMUST00000097270 612 ntBASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trpm6Q8CIR4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trpm6Q8CIR4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm6Q8CIR4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm6Q8CIR4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm6Q8CIR4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trpm6Q8CIR4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.59■□□□□ 0.89
Trpm6Q8CIR4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms