Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.28■■□□□ 1
Kdm1bQ8CIG3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.28■■□□□ 1
Kdm1bQ8CIG3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Gm5812-201ENSMUST00000061073 957 ntBASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1bQ8CIG3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm1bQ8CIG3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm1bQ8CIG3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1bQ8CIG3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1bQ8CIG3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1bQ8CIG3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.26■□□□□ 0.99
Kdm1bQ8CIG3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.26■□□□□ 0.99
Kdm1bQ8CIG3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1bQ8CIG3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1bQ8CIG3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1bQ8CIG3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1bQ8CIG3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1bQ8CIG3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kdm1bQ8CIG3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.21■□□□□ 0.99
Kdm1bQ8CIG3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Kdm1bQ8CIG3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1bQ8CIG3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Kdm1bQ8CIG3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Kdm1bQ8CIG3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms