Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.93■□□□□ 0.78
Rdh1Q8CGV4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rdh1Q8CGV4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rdh1Q8CGV4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rdh1Q8CGV4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rdh1Q8CGV4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rdh1Q8CGV4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.91■□□□□ 0.78
Rdh1Q8CGV4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rdh1Q8CGV4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rdh1Q8CGV4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rdh1Q8CGV4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rdh1Q8CGV4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rdh1Q8CGV4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.89■□□□□ 0.77
Rdh1Q8CGV4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rdh1Q8CGV4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rdh1Q8CGV4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rdh1Q8CGV4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.89■□□□□ 0.77
Rdh1Q8CGV4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rdh1Q8CGV4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rdh1Q8CGV4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rdh1Q8CGV4 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rdh1Q8CGV4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.88■□□□□ 0.77
Rdh1Q8CGV4 Serp2-204ENSMUST00000228055 705 ntBASIC19.88■□□□□ 0.77
Rdh1Q8CGV4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rdh1Q8CGV4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rdh1Q8CGV4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rdh1Q8CGV4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Mir7075-201ENSMUST00000184187 82 ntBASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.86■□□□□ 0.77
Rdh1Q8CGV4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rdh1Q8CGV4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 Gm6139-201ENSMUST00000079261 882 ntBASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rdh1Q8CGV4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rdh1Q8CGV4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Rdh1Q8CGV4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rdh1Q8CGV4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rdh1Q8CGV4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rdh1Q8CGV4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rdh1Q8CGV4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rdh1Q8CGV4 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.82■□□□□ 0.76
Rdh1Q8CGV4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rdh1Q8CGV4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.82■□□□□ 0.76
Rdh1Q8CGV4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.81■□□□□ 0.76
Rdh1Q8CGV4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rdh1Q8CGV4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rdh1Q8CGV4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rdh1Q8CGV4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rdh1Q8CGV4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms