Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf222Q8CEF8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf222Q8CEF8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.08■□□□□ 0.81
Rnf222Q8CEF8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rnf222Q8CEF8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf222Q8CEF8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf222Q8CEF8 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf222Q8CEF8 Mir7075-201ENSMUST00000184187 82 ntBASIC20.06■□□□□ 0.8
Rnf222Q8CEF8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Rnf222Q8CEF8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.06■□□□□ 0.8
Rnf222Q8CEF8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf222Q8CEF8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf222Q8CEF8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.06■□□□□ 0.8
Rnf222Q8CEF8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Serp2-204ENSMUST00000228055 705 ntBASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Gm6139-201ENSMUST00000079261 882 ntBASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf222Q8CEF8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf222Q8CEF8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf222Q8CEF8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf222Q8CEF8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf222Q8CEF8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf222Q8CEF8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf222Q8CEF8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf222Q8CEF8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf222Q8CEF8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Rnf222Q8CEF8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rnf222Q8CEF8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf222Q8CEF8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf222Q8CEF8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf222Q8CEF8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf222Q8CEF8 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.02■□□□□ 0.8
Rnf222Q8CEF8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
Rnf222Q8CEF8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf222Q8CEF8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf222Q8CEF8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf222Q8CEF8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf222Q8CEF8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Rnf222Q8CEF8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.02■□□□□ 0.79
Rnf222Q8CEF8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf222Q8CEF8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Rnf222Q8CEF8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rnf222Q8CEF8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Rnf222Q8CEF8 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rnf222Q8CEF8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf222Q8CEF8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf222Q8CEF8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf222Q8CEF8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf222Q8CEF8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf222Q8CEF8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf222Q8CEF8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Gm8493-201ENSMUST00000196881 489 ntBASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rnf222Q8CEF8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms