Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Chd9Q8BYH8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Chd9Q8BYH8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Chd9Q8BYH8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Gm4968-201ENSMUST00000071458 858 ntBASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Gm10812-201ENSMUST00000099864 546 ntBASIC16.36■□□□□ 0.21
Chd9Q8BYH8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Gm13168-201ENSMUST00000121771 632 ntBASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Gm21362-201ENSMUST00000194272 928 ntBASIC16.35■□□□□ 0.21
Chd9Q8BYH8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.35■□□□□ 0.21
Chd9Q8BYH8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.35■□□□□ 0.21
Chd9Q8BYH8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chd9Q8BYH8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.33■□□□□ 0.21
Chd9Q8BYH8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.33■□□□□ 0.21
Chd9Q8BYH8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chd9Q8BYH8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chd9Q8BYH8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chd9Q8BYH8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd9Q8BYH8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chd9Q8BYH8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chd9Q8BYH8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.32■□□□□ 0.2
Chd9Q8BYH8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd9Q8BYH8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.32■□□□□ 0.2
Chd9Q8BYH8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chd9Q8BYH8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chd9Q8BYH8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.32■□□□□ 0.2
Chd9Q8BYH8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd9Q8BYH8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Chd9Q8BYH8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.31■□□□□ 0.2
Chd9Q8BYH8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.31■□□□□ 0.2
Chd9Q8BYH8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Chd9Q8BYH8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.31■□□□□ 0.2
Chd9Q8BYH8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.31■□□□□ 0.2
Chd9Q8BYH8 Gm9870-201ENSMUST00000063874 645 ntBASIC16.31■□□□□ 0.2
Chd9Q8BYH8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chd9Q8BYH8 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.3■□□□□ 0.2
Chd9Q8BYH8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chd9Q8BYH8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms