Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scn3bQ8BHK2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn3bQ8BHK2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn3bQ8BHK2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.98■□□□□ 0.63
Scn3bQ8BHK2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn3bQ8BHK2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.98■□□□□ 0.63
Scn3bQ8BHK2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn3bQ8BHK2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn3bQ8BHK2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn3bQ8BHK2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Scn3bQ8BHK2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn3bQ8BHK2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn3bQ8BHK2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn3bQ8BHK2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn3bQ8BHK2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn3bQ8BHK2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn3bQ8BHK2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.93■□□□□ 0.62
Scn3bQ8BHK2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Scn3bQ8BHK2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn3bQ8BHK2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn3bQ8BHK2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Scn3bQ8BHK2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scn3bQ8BHK2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn3bQ8BHK2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn3bQ8BHK2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn3bQ8BHK2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms