Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn3Q8BHH8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.09■□□□□ 0.65
Clrn3Q8BHH8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn3Q8BHH8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
Clrn3Q8BHH8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn3Q8BHH8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn3Q8BHH8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clrn3Q8BHH8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clrn3Q8BHH8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Clrn3Q8BHH8 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.08■□□□□ 0.65
Clrn3Q8BHH8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn3Q8BHH8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn3Q8BHH8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clrn3Q8BHH8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clrn3Q8BHH8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clrn3Q8BHH8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Clrn3Q8BHH8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clrn3Q8BHH8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn3Q8BHH8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Clrn3Q8BHH8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clrn3Q8BHH8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clrn3Q8BHH8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.02■□□□□ 0.64
Clrn3Q8BHH8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clrn3Q8BHH8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clrn3Q8BHH8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clrn3Q8BHH8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clrn3Q8BHH8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clrn3Q8BHH8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clrn3Q8BHH8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clrn3Q8BHH8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Clrn3Q8BHH8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 Gm7417-201ENSMUST00000192950 473 ntBASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clrn3Q8BHH8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clrn3Q8BHH8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms