Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Prpf40bQ80W14 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Prpf40bQ80W14 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Prpf40bQ80W14 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.58■■□□□ 1.36
Prpf40bQ80W14 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Prpf40bQ80W14 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf40bQ80W14 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf40bQ80W14 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.56■■□□□ 1.36
Prpf40bQ80W14 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf40bQ80W14 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf40bQ80W14 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Prpf40bQ80W14 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Prpf40bQ80W14 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Prpf40bQ80W14 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.55■■□□□ 1.36
Prpf40bQ80W14 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.55■■□□□ 1.36
Prpf40bQ80W14 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf40bQ80W14 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Prpf40bQ80W14 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf40bQ80W14 Gm9870-201ENSMUST00000063874 645 ntBASIC23.54■■□□□ 1.36
Prpf40bQ80W14 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf40bQ80W14 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Prpf40bQ80W14 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Prpf40bQ80W14 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Prpf40bQ80W14 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf40bQ80W14 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf40bQ80W14 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf40bQ80W14 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.53■■□□□ 1.36
Prpf40bQ80W14 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Prpf40bQ80W14 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Prpf40bQ80W14 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Prpf40bQ80W14 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Prpf40bQ80W14 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Gm27011-201ENSMUST00000182352 972 ntBASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Gm42569-201ENSMUST00000200539 472 ntBASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Prpf40bQ80W14 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Prpf40bQ80W14 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Prpf40bQ80W14 Gm26571-201ENSMUST00000181399 666 ntBASIC23.48■■□□□ 1.35
Prpf40bQ80W14 Gm27405-201ENSMUST00000184201 112 ntBASIC23.48■■□□□ 1.35
Prpf40bQ80W14 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Prpf40bQ80W14 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Prpf40bQ80W14 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf40bQ80W14 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf40bQ80W14 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Prpf40bQ80W14 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Prpf40bQ80W14 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.45■■□□□ 1.35
Prpf40bQ80W14 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms