Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prdm4Q80V63 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Prdm4Q80V63 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Prdm4Q80V63 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Prdm4Q80V63 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Prdm4Q80V63 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Prdm4Q80V63 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prdm4Q80V63 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prdm4Q80V63 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prdm4Q80V63 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Prdm4Q80V63 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Prdm4Q80V63 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Prdm4Q80V63 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.06■□□□□ 0.96
Prdm4Q80V63 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Prdm4Q80V63 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Prdm4Q80V63 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Prdm4Q80V63 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Prdm4Q80V63 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm4Q80V63 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Prdm4Q80V63 Golph3-205ENSMUST00000228671 2842 ntBASIC21.04■□□□□ 0.96
Prdm4Q80V63 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.04■□□□□ 0.96
Prdm4Q80V63 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Prdm4Q80V63 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm4Q80V63 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Prdm4Q80V63 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm4Q80V63 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Prdm4Q80V63 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm4Q80V63 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Prdm4Q80V63 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm4Q80V63 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm4Q80V63 Gm7332-201ENSMUST00000118351 454 ntBASIC21.02■□□□□ 0.96
Prdm4Q80V63 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm4Q80V63 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Prdm4Q80V63 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Prdm4Q80V63 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Prdm4Q80V63 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Prdm4Q80V63 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm4Q80V63 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm4Q80V63 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.01■□□□□ 0.95
Prdm4Q80V63 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm4Q80V63 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm4Q80V63 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Prdm4Q80V63 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21■□□□□ 0.95
Prdm4Q80V63 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm4Q80V63 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Prdm4Q80V63 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21■□□□□ 0.95
Prdm4Q80V63 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm4Q80V63 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21■□□□□ 0.95
Prdm4Q80V63 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21■□□□□ 0.95
Prdm4Q80V63 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm4Q80V63 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm4Q80V63 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21■□□□□ 0.95
Prdm4Q80V63 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm4Q80V63 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Prdm4Q80V63 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Prdm4Q80V63 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prdm4Q80V63 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Prdm4Q80V63 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.99■□□□□ 0.95
Prdm4Q80V63 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prdm4Q80V63 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prdm4Q80V63 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms