Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhga7Q6DD96 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Pcdhga7Q6DD96 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdhga7Q6DD96 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Pcdhga7Q6DD96 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdhga7Q6DD96 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdhga7Q6DD96 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Gm43566-201ENSMUST00000196851 808 ntBASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Gm5921-201ENSMUST00000075898 882 ntBASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhga7Q6DD96 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhga7Q6DD96 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhga7Q6DD96 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhga7Q6DD96 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhga7Q6DD96 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms