Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sqstm1Q64337 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sqstm1Q64337 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sqstm1Q64337 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.15■□□□□ 0.5
Sqstm1Q64337 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sqstm1Q64337 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Sqstm1Q64337 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sqstm1Q64337 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.14■□□□□ 0.5
Sqstm1Q64337 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sqstm1Q64337 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.14■□□□□ 0.49
Sqstm1Q64337 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sqstm1Q64337 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sqstm1Q64337 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sqstm1Q64337 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sqstm1Q64337 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Sqstm1Q64337 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sqstm1Q64337 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.13■□□□□ 0.49
Sqstm1Q64337 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.13■□□□□ 0.49
Sqstm1Q64337 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sqstm1Q64337 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sqstm1Q64337 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.11■□□□□ 0.49
Sqstm1Q64337 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sqstm1Q64337 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sqstm1Q64337 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sqstm1Q64337 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sqstm1Q64337 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sqstm1Q64337 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sqstm1Q64337 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sqstm1Q64337 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Sqstm1Q64337 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.1■□□□□ 0.49
Sqstm1Q64337 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Gm11599-201ENSMUST00000118720 878 ntBASIC18.09■□□□□ 0.49
Sqstm1Q64337 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Sqstm1Q64337 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sqstm1Q64337 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.09■□□□□ 0.49
Sqstm1Q64337 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sqstm1Q64337 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sqstm1Q64337 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.08■□□□□ 0.49
Sqstm1Q64337 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sqstm1Q64337 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sqstm1Q64337 Gm44428-201ENSMUST00000204474 874 ntBASIC18.08■□□□□ 0.48
Sqstm1Q64337 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.08■□□□□ 0.48
Sqstm1Q64337 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sqstm1Q64337 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sqstm1Q64337 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sqstm1Q64337 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sqstm1Q64337 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sqstm1Q64337 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms