Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox16Q62247 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox16Q62247 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox16Q62247 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.71□□□□□ -0.53
Sox16Q62247 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.71□□□□□ -0.53
Sox16Q62247 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox16Q62247 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sox16Q62247 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox16Q62247 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sox16Q62247 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox16Q62247 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox16Q62247 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sox16Q62247 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sox16Q62247 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC11.7□□□□□ -0.54
Sox16Q62247 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Sox16Q62247 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Sox16Q62247 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sox16Q62247 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Sox16Q62247 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sox16Q62247 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Sox16Q62247 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox16Q62247 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox16Q62247 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sox16Q62247 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sox16Q62247 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC11.68□□□□□ -0.54
Sox16Q62247 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox16Q62247 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC11.68□□□□□ -0.54
Sox16Q62247 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Sox16Q62247 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Sox16Q62247 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Sox16Q62247 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC11.67□□□□□ -0.54
Sox16Q62247 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Sox16Q62247 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sox16Q62247 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC11.66□□□□□ -0.54
Sox16Q62247 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Sox16Q62247 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.66□□□□□ -0.54
Sox16Q62247 Gm5540-201ENSMUST00000131852 1848 ntBASIC11.66□□□□□ -0.54
Sox16Q62247 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sox16Q62247 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms