Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Notch3Q61982 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Notch3Q61982 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.57■□□□□ 0.08
Notch3Q61982 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Notch3Q61982 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.57■□□□□ 0.08
Notch3Q61982 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Notch3Q61982 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Notch3Q61982 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Notch3Q61982 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Notch3Q61982 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Notch3Q61982 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Notch3Q61982 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Notch3Q61982 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Notch3Q61982 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Notch3Q61982 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Notch3Q61982 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Notch3Q61982 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Notch3Q61982 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Notch3Q61982 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.54■□□□□ 0.08
Notch3Q61982 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.54■□□□□ 0.08
Notch3Q61982 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Notch3Q61982 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch3Q61982 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Notch3Q61982 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch3Q61982 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Notch3Q61982 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.53■□□□□ 0.08
Notch3Q61982 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.53■□□□□ 0.08
Notch3Q61982 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Notch3Q61982 Gm9870-201ENSMUST00000063874 645 ntBASIC15.53■□□□□ 0.08
Notch3Q61982 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Notch3Q61982 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch3Q61982 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Notch3Q61982 Gm12251-201ENSMUST00000117893 792 ntBASIC15.52■□□□□ 0.08
Notch3Q61982 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.52■□□□□ 0.08
Notch3Q61982 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch3Q61982 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Notch3Q61982 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.52■□□□□ 0.08
Notch3Q61982 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch3Q61982 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch3Q61982 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch3Q61982 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Notch3Q61982 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Notch3Q61982 Gm43173-201ENSMUST00000202246 593 ntBASIC15.52■□□□□ 0.07
Notch3Q61982 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Notch3Q61982 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch3Q61982 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
Notch3Q61982 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.51■□□□□ 0.07
Notch3Q61982 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.51■□□□□ 0.07
Notch3Q61982 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Notch3Q61982 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.51■□□□□ 0.07
Notch3Q61982 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Notch3Q61982 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch3Q61982 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Notch3Q61982 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch3Q61982 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Notch3Q61982 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.51■□□□□ 0.07
Notch3Q61982 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Notch3Q61982 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.5■□□□□ 0.07
Notch3Q61982 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Notch3Q61982 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Notch3Q61982 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Notch3Q61982 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Notch3Q61982 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.49■□□□□ 0.07
Notch3Q61982 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.49■□□□□ 0.07
Notch3Q61982 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Notch3Q61982 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Notch3Q61982 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms