Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdf4Q61112 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdf4Q61112 Gm45102-201ENSMUST00000207427 857 ntBASIC20.74■□□□□ 0.91
Sdf4Q61112 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sdf4Q61112 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdf4Q61112 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sdf4Q61112 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sdf4Q61112 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.73■□□□□ 0.91
Sdf4Q61112 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sdf4Q61112 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.72■□□□□ 0.91
Sdf4Q61112 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Sdf4Q61112 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdf4Q61112 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdf4Q61112 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdf4Q61112 Gm14117-201ENSMUST00000122417 843 ntBASIC20.71■□□□□ 0.91
Sdf4Q61112 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.71■□□□□ 0.91
Sdf4Q61112 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Sdf4Q61112 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdf4Q61112 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdf4Q61112 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.7■□□□□ 0.9
Sdf4Q61112 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdf4Q61112 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.7■□□□□ 0.9
Sdf4Q61112 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.7■□□□□ 0.9
Sdf4Q61112 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdf4Q61112 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdf4Q61112 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdf4Q61112 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdf4Q61112 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdf4Q61112 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sdf4Q61112 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdf4Q61112 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdf4Q61112 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdf4Q61112 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sdf4Q61112 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdf4Q61112 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdf4Q61112 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Sdf4Q61112 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdf4Q61112 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdf4Q61112 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdf4Q61112 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdf4Q61112 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdf4Q61112 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.68■□□□□ 0.9
Sdf4Q61112 Gm7143-201ENSMUST00000222811 859 ntBASIC20.68■□□□□ 0.9
Sdf4Q61112 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sdf4Q61112 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdf4Q61112 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.67■□□□□ 0.9
Sdf4Q61112 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.67■□□□□ 0.9
Sdf4Q61112 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sdf4Q61112 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdf4Q61112 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdf4Q61112 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdf4Q61112 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.66■□□□□ 0.9
Sdf4Q61112 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Sdf4Q61112 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Sdf4Q61112 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdf4Q61112 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdf4Q61112 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sdf4Q61112 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdf4Q61112 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Sdf4Q61112 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdf4Q61112 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdf4Q61112 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdf4Q61112 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sdf4Q61112 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sdf4Q61112 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdf4Q61112 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
Sdf4Q61112 Gm22238-201ENSMUST00000175222 88 ntBASIC20.64■□□□□ 0.89
Sdf4Q61112 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdf4Q61112 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sdf4Q61112 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdf4Q61112 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdf4Q61112 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sdf4Q61112 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.63■□□□□ 0.89
Sdf4Q61112 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdf4Q61112 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdf4Q61112 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sdf4Q61112 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sdf4Q61112 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdf4Q61112 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdf4Q61112 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.62■□□□□ 0.89
Sdf4Q61112 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdf4Q61112 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.62■□□□□ 0.89
Sdf4Q61112 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sdf4Q61112 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.62■□□□□ 0.89
Sdf4Q61112 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms