Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Col12a1Q60847 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col12a1Q60847 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.7■□□□□ 0.9
Col12a1Q60847 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.7■□□□□ 0.9
Col12a1Q60847 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Col12a1Q60847 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col12a1Q60847 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col12a1Q60847 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col12a1Q60847 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.69■□□□□ 0.9
Col12a1Q60847 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.69■□□□□ 0.9
Col12a1Q60847 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Col12a1Q60847 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col12a1Q60847 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col12a1Q60847 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col12a1Q60847 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col12a1Q60847 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col12a1Q60847 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Col12a1Q60847 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col12a1Q60847 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.68■□□□□ 0.9
Col12a1Q60847 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Col12a1Q60847 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.68■□□□□ 0.9
Col12a1Q60847 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Col12a1Q60847 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.67■□□□□ 0.9
Col12a1Q60847 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Col12a1Q60847 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col12a1Q60847 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.66■□□□□ 0.9
Col12a1Q60847 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.66■□□□□ 0.9
Col12a1Q60847 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col12a1Q60847 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col12a1Q60847 Gm7143-201ENSMUST00000222811 859 ntBASIC20.66■□□□□ 0.9
Col12a1Q60847 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Col12a1Q60847 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Col12a1Q60847 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.65■□□□□ 0.9
Col12a1Q60847 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.65■□□□□ 0.9
Col12a1Q60847 AC130671.1-201ENSMUST00000227384 1237 ntBASIC20.65■□□□□ 0.9
Col12a1Q60847 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.65■□□□□ 0.9
Col12a1Q60847 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.65■□□□□ 0.9
Col12a1Q60847 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col12a1Q60847 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
Col12a1Q60847 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Col12a1Q60847 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.64■□□□□ 0.89
Col12a1Q60847 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Col12a1Q60847 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col12a1Q60847 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Col12a1Q60847 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col12a1Q60847 Gm12441-201ENSMUST00000121806 588 ntBASIC20.63■□□□□ 0.89
Col12a1Q60847 Gm43530-201ENSMUST00000195920 274 ntBASIC20.63■□□□□ 0.89
Col12a1Q60847 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Col12a1Q60847 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Col12a1Q60847 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
Col12a1Q60847 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col12a1Q60847 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col12a1Q60847 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col12a1Q60847 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Col12a1Q60847 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col12a1Q60847 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col12a1Q60847 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.62■□□□□ 0.89
Col12a1Q60847 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.61■□□□□ 0.89
Col12a1Q60847 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.61■□□□□ 0.89
Col12a1Q60847 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Col12a1Q60847 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col12a1Q60847 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Col12a1Q60847 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col12a1Q60847 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col12a1Q60847 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Col12a1Q60847 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.6■□□□□ 0.89
Col12a1Q60847 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col12a1Q60847 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.6■□□□□ 0.89
Col12a1Q60847 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Col12a1Q60847 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col12a1Q60847 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col12a1Q60847 Gm4968-201ENSMUST00000071458 858 ntBASIC20.58■□□□□ 0.89
Col12a1Q60847 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col12a1Q60847 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col12a1Q60847 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col12a1Q60847 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col12a1Q60847 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col12a1Q60847 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col12a1Q60847 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.57■□□□□ 0.88
Col12a1Q60847 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col12a1Q60847 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col12a1Q60847 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Col12a1Q60847 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col12a1Q60847 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Col12a1Q60847 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Col12a1Q60847 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms