Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim38Q5SZ99 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim38Q5SZ99 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim38Q5SZ99 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim38Q5SZ99 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Trim38Q5SZ99 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim38Q5SZ99 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim38Q5SZ99 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.2■□□□□ 0.98
Trim38Q5SZ99 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim38Q5SZ99 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim38Q5SZ99 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim38Q5SZ99 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim38Q5SZ99 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim38Q5SZ99 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim38Q5SZ99 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim38Q5SZ99 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim38Q5SZ99 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Trim38Q5SZ99 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.18■□□□□ 0.98
Trim38Q5SZ99 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim38Q5SZ99 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim38Q5SZ99 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim38Q5SZ99 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Gm5812-201ENSMUST00000061073 957 ntBASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim38Q5SZ99 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Gm15820-201ENSMUST00000201566 728 ntBASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim38Q5SZ99 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.15■□□□□ 0.98
Trim38Q5SZ99 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim38Q5SZ99 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim38Q5SZ99 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim38Q5SZ99 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim38Q5SZ99 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim38Q5SZ99 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim38Q5SZ99 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim38Q5SZ99 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim38Q5SZ99 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim38Q5SZ99 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim38Q5SZ99 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim38Q5SZ99 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.12■□□□□ 0.97
Trim38Q5SZ99 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim38Q5SZ99 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim38Q5SZ99 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim38Q5SZ99 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.1■□□□□ 0.97
Trim38Q5SZ99 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim38Q5SZ99 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim38Q5SZ99 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.1■□□□□ 0.97
Trim38Q5SZ99 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim38Q5SZ99 Gm15546-201ENSMUST00000122095 826 ntBASIC21.09■□□□□ 0.97
Trim38Q5SZ99 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim38Q5SZ99 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim38Q5SZ99 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim38Q5SZ99 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim38Q5SZ99 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms