Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav7d-4Q5R1H9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav7d-4Q5R1H9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav7d-4Q5R1H9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Gm45364-201ENSMUST00000210883 159 ntBASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav7d-4Q5R1H9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav7d-4Q5R1H9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7d-4Q5R1H9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav7d-4Q5R1H9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7d-4Q5R1H9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7d-4Q5R1H9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7d-4Q5R1H9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav7d-4Q5R1H9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.52■□□□□ 0.07
Trav7d-4Q5R1H9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7d-4Q5R1H9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7d-4Q5R1H9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7d-4Q5R1H9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Trav7d-4Q5R1H9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7d-4Q5R1H9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav7d-4Q5R1H9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav7d-4Q5R1H9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav7d-4Q5R1H9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav7d-4Q5R1H9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms