Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.19■□□□□ 0.98
Bdp1Q571C7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Bdp1Q571C7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bdp1Q571C7 Gm13836-201ENSMUST00000121159 501 ntBASIC21.19■□□□□ 0.98
Bdp1Q571C7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
Bdp1Q571C7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Bdp1Q571C7 Reep4-203ENSMUST00000226563 1444 ntBASIC21.18■□□□□ 0.98
Bdp1Q571C7 Gm13168-201ENSMUST00000121771 632 ntBASIC21.18■□□□□ 0.98
Bdp1Q571C7 Gm11421-201ENSMUST00000122124 294 ntBASIC21.18■□□□□ 0.98
Bdp1Q571C7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Bdp1Q571C7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Bdp1Q571C7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Bdp1Q571C7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.17■□□□□ 0.98
Bdp1Q571C7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Bdp1Q571C7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bdp1Q571C7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.16■□□□□ 0.98
Bdp1Q571C7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Bdp1Q571C7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Bdp1Q571C7 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.15■□□□□ 0.98
Bdp1Q571C7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Bdp1Q571C7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.15■□□□□ 0.98
Bdp1Q571C7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Bdp1Q571C7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Bdp1Q571C7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Bdp1Q571C7 Gm37856-201ENSMUST00000191634 999 ntBASIC21.15■□□□□ 0.98
Bdp1Q571C7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.15■□□□□ 0.98
Bdp1Q571C7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.15■□□□□ 0.98
Bdp1Q571C7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.15■□□□□ 0.98
Bdp1Q571C7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Bdp1Q571C7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Bdp1Q571C7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Gm13234-201ENSMUST00000120010 747 ntBASIC21.14■□□□□ 0.97
Bdp1Q571C7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Gm10812-201ENSMUST00000099864 546 ntBASIC21.14■□□□□ 0.97
Bdp1Q571C7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
Bdp1Q571C7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Bdp1Q571C7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Bdp1Q571C7 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.13■□□□□ 0.97
Bdp1Q571C7 Gm20049-201ENSMUST00000219950 730 ntBASIC21.13■□□□□ 0.97
Bdp1Q571C7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Bdp1Q571C7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Bdp1Q571C7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Bdp1Q571C7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Bdp1Q571C7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Bdp1Q571C7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Bdp1Q571C7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Bdp1Q571C7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Bdp1Q571C7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Bdp1Q571C7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Bdp1Q571C7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Bdp1Q571C7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Bdp1Q571C7 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.11■□□□□ 0.97
Bdp1Q571C7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.11■□□□□ 0.97
Bdp1Q571C7 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.11■□□□□ 0.97
Bdp1Q571C7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Bdp1Q571C7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.1■□□□□ 0.97
Bdp1Q571C7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Bdp1Q571C7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Bdp1Q571C7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Bdp1Q571C7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Bdp1Q571C7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Bdp1Q571C7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Bdp1Q571C7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Bdp1Q571C7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.09■□□□□ 0.97
Bdp1Q571C7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Bdp1Q571C7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Bdp1Q571C7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Bdp1Q571C7 Gm7514-201ENSMUST00000209475 934 ntBASIC21.09■□□□□ 0.97
Bdp1Q571C7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Bdp1Q571C7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Bdp1Q571C7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Bdp1Q571C7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Bdp1Q571C7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Bdp1Q571C7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms