Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Gm43530-201ENSMUST00000195920 274 ntBASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rc3h1Q4VGL6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.76■■□□□ 1.39
Rc3h1Q4VGL6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rc3h1Q4VGL6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Rc3h1Q4VGL6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.75■■□□□ 1.39
Rc3h1Q4VGL6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.75■■□□□ 1.39
Rc3h1Q4VGL6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rc3h1Q4VGL6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rc3h1Q4VGL6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rc3h1Q4VGL6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Gm6139-201ENSMUST00000079261 882 ntBASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rc3h1Q4VGL6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Rc3h1Q4VGL6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rc3h1Q4VGL6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rc3h1Q4VGL6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
Rc3h1Q4VGL6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Rc3h1Q4VGL6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rc3h1Q4VGL6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.71■■□□□ 1.39
Rc3h1Q4VGL6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rc3h1Q4VGL6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
Rc3h1Q4VGL6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Rc3h1Q4VGL6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Mir7075-201ENSMUST00000184187 82 ntBASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rc3h1Q4VGL6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rc3h1Q4VGL6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.68■■□□□ 1.38
Rc3h1Q4VGL6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rc3h1Q4VGL6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rc3h1Q4VGL6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.67■■□□□ 1.38
Rc3h1Q4VGL6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rc3h1Q4VGL6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Rc3h1Q4VGL6 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.67■■□□□ 1.38
Rc3h1Q4VGL6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rc3h1Q4VGL6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rc3h1Q4VGL6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rc3h1Q4VGL6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rc3h1Q4VGL6 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.66■■□□□ 1.38
Rc3h1Q4VGL6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rc3h1Q4VGL6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rc3h1Q4VGL6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Rc3h1Q4VGL6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rc3h1Q4VGL6 Gm12251-201ENSMUST00000117893 792 ntBASIC23.64■■□□□ 1.37
Rc3h1Q4VGL6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Rc3h1Q4VGL6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Rc3h1Q4VGL6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rc3h1Q4VGL6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rc3h1Q4VGL6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rc3h1Q4VGL6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rc3h1Q4VGL6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rc3h1Q4VGL6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rc3h1Q4VGL6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms