Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Lrrc28Q3TX51 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lrrc28Q3TX51 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc28Q3TX51 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Gm43137-201ENSMUST00000198052 594 ntBASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lrrc28Q3TX51 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lrrc28Q3TX51 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc28Q3TX51 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc28Q3TX51 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Lrrc28Q3TX51 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrc28Q3TX51 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Lrrc28Q3TX51 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Gm6139-201ENSMUST00000079261 882 ntBASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc28Q3TX51 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc28Q3TX51 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc28Q3TX51 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc28Q3TX51 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc28Q3TX51 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc28Q3TX51 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.32■□□□□ 0.68
Lrrc28Q3TX51 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.32■□□□□ 0.68
Lrrc28Q3TX51 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Gm43530-201ENSMUST00000195920 274 ntBASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.31■□□□□ 0.68
Lrrc28Q3TX51 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrrc28Q3TX51 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Lrrc28Q3TX51 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms