Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Sem1P60897 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Sem1P60897 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.42■□□□□ 0.7
Sem1P60897 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sem1P60897 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sem1P60897 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sem1P60897 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sem1P60897 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sem1P60897 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sem1P60897 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.4■□□□□ 0.7
Sem1P60897 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sem1P60897 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
Sem1P60897 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sem1P60897 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.39■□□□□ 0.69
Sem1P60897 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.39■□□□□ 0.69
Sem1P60897 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Sem1P60897 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sem1P60897 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sem1P60897 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sem1P60897 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.39■□□□□ 0.69
Sem1P60897 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.39■□□□□ 0.69
Sem1P60897 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sem1P60897 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.38■□□□□ 0.69
Sem1P60897 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sem1P60897 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sem1P60897 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.38■□□□□ 0.69
Sem1P60897 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sem1P60897 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sem1P60897 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sem1P60897 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.38■□□□□ 0.69
Sem1P60897 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sem1P60897 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sem1P60897 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sem1P60897 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.37■□□□□ 0.69
Sem1P60897 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sem1P60897 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.37■□□□□ 0.69
Sem1P60897 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sem1P60897 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sem1P60897 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sem1P60897 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sem1P60897 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sem1P60897 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sem1P60897 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sem1P60897 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.35■□□□□ 0.69
Sem1P60897 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sem1P60897 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sem1P60897 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sem1P60897 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sem1P60897 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
Sem1P60897 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sem1P60897 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sem1P60897 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sem1P60897 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sem1P60897 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sem1P60897 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sem1P60897 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sem1P60897 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sem1P60897 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sem1P60897 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.33■□□□□ 0.68
Sem1P60897 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sem1P60897 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sem1P60897 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sem1P60897 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms