Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CckbrP56481 Gm7143-201ENSMUST00000222811 859 ntBASIC18.9■□□□□ 0.62
CckbrP56481 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CckbrP56481 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CckbrP56481 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CckbrP56481 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CckbrP56481 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CckbrP56481 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CckbrP56481 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CckbrP56481 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CckbrP56481 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.89■□□□□ 0.61
CckbrP56481 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CckbrP56481 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.88■□□□□ 0.61
CckbrP56481 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.88■□□□□ 0.61
CckbrP56481 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CckbrP56481 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CckbrP56481 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CckbrP56481 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CckbrP56481 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CckbrP56481 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CckbrP56481 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CckbrP56481 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CckbrP56481 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CckbrP56481 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CckbrP56481 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CckbrP56481 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.86■□□□□ 0.61
CckbrP56481 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.86■□□□□ 0.61
CckbrP56481 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CckbrP56481 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CckbrP56481 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CckbrP56481 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CckbrP56481 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.85■□□□□ 0.61
CckbrP56481 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Gm9870-201ENSMUST00000063874 645 ntBASIC18.85■□□□□ 0.61
CckbrP56481 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CckbrP56481 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CckbrP56481 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CckbrP56481 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CckbrP56481 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CckbrP56481 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CckbrP56481 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CckbrP56481 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.83■□□□□ 0.6
CckbrP56481 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CckbrP56481 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CckbrP56481 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.83■□□□□ 0.6
CckbrP56481 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CckbrP56481 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CckbrP56481 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CckbrP56481 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.83■□□□□ 0.6
CckbrP56481 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CckbrP56481 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CckbrP56481 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.82■□□□□ 0.6
CckbrP56481 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.82■□□□□ 0.6
CckbrP56481 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CckbrP56481 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
CckbrP56481 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CckbrP56481 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CckbrP56481 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CckbrP56481 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CckbrP56481 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CckbrP56481 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CckbrP56481 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CckbrP56481 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CckbrP56481 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.81■□□□□ 0.6
CckbrP56481 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.81■□□□□ 0.6
CckbrP56481 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CckbrP56481 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CckbrP56481 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CckbrP56481 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CckbrP56481 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CckbrP56481 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CckbrP56481 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CckbrP56481 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CckbrP56481 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CckbrP56481 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CckbrP56481 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CckbrP56481 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CckbrP56481 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CckbrP56481 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms