Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.73■□□□□ 0.75
Tnfsf4P43488 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf4P43488 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf4P43488 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.71■□□□□ 0.75
Tnfsf4P43488 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf4P43488 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Tnfsf4P43488 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf4P43488 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfsf4P43488 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfsf4P43488 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfsf4P43488 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tnfsf4P43488 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.69■□□□□ 0.74
Tnfsf4P43488 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.69■□□□□ 0.74
Tnfsf4P43488 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf4P43488 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.68■□□□□ 0.74
Tnfsf4P43488 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf4P43488 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf4P43488 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf4P43488 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf4P43488 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf4P43488 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf4P43488 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf4P43488 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf4P43488 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tnfsf4P43488 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Tnfsf4P43488 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tnfsf4P43488 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.67■□□□□ 0.74
Tnfsf4P43488 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Gm45444-201ENSMUST00000211394 898 ntBASIC19.66■□□□□ 0.74
Tnfsf4P43488 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tnfsf4P43488 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.66■□□□□ 0.74
Tnfsf4P43488 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tnfsf4P43488 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf4P43488 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms