Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thbs1P35441 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Thbs1P35441 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thbs1P35441 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thbs1P35441 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Thbs1P35441 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.89■□□□□ 0.61
Thbs1P35441 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.89■□□□□ 0.61
Thbs1P35441 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Thbs1P35441 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Thbs1P35441 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thbs1P35441 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Thbs1P35441 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thbs1P35441 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Thbs1P35441 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.88■□□□□ 0.61
Thbs1P35441 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.88■□□□□ 0.61
Thbs1P35441 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thbs1P35441 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
Thbs1P35441 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thbs1P35441 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thbs1P35441 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Thbs1P35441 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Thbs1P35441 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.87■□□□□ 0.61
Thbs1P35441 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thbs1P35441 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.86■□□□□ 0.61
Thbs1P35441 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.86■□□□□ 0.61
Thbs1P35441 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Thbs1P35441 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Thbs1P35441 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.86■□□□□ 0.61
Thbs1P35441 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Thbs1P35441 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.85■□□□□ 0.61
Thbs1P35441 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thbs1P35441 Gm40881-201ENSMUST00000223397 166 ntBASIC18.85■□□□□ 0.61
Thbs1P35441 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Thbs1P35441 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Thbs1P35441 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Thbs1P35441 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Thbs1P35441 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Thbs1P35441 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Thbs1P35441 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.61
Thbs1P35441 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.83■□□□□ 0.6
Thbs1P35441 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.83■□□□□ 0.6
Thbs1P35441 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Thbs1P35441 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thbs1P35441 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Thbs1P35441 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Thbs1P35441 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.82■□□□□ 0.6
Thbs1P35441 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thbs1P35441 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Thbs1P35441 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thbs1P35441 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thbs1P35441 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Thbs1P35441 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.81■□□□□ 0.6
Thbs1P35441 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.81■□□□□ 0.6
Thbs1P35441 Gm45102-201ENSMUST00000207427 857 ntBASIC18.81■□□□□ 0.6
Thbs1P35441 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.81■□□□□ 0.6
Thbs1P35441 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Thbs1P35441 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.81■□□□□ 0.6
Thbs1P35441 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Thbs1P35441 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Thbs1P35441 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thbs1P35441 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.8■□□□□ 0.6
Thbs1P35441 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Thbs1P35441 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thbs1P35441 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thbs1P35441 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thbs1P35441 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.8■□□□□ 0.6
Thbs1P35441 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Thbs1P35441 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms