Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Notumos-201ENSMUST00000151998 2659 ntBASIC19.82■□□□□ 0.76
Fv4P11370 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fv4P11370 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.82■□□□□ 0.76
Fv4P11370 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Fv4P11370 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Fv4P11370 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fv4P11370 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fv4P11370 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fv4P11370 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Fv4P11370 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.81■□□□□ 0.76
Fv4P11370 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.81■□□□□ 0.76
Fv4P11370 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Fv4P11370 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Fv4P11370 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fv4P11370 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Fv4P11370 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.8■□□□□ 0.76
Fv4P11370 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fv4P11370 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Fv4P11370 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.79■□□□□ 0.76
Fv4P11370 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Fv4P11370 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fv4P11370 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fv4P11370 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fv4P11370 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.78■□□□□ 0.76
Fv4P11370 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Fv4P11370 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Fv4P11370 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Fv4P11370 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Fv4P11370 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fv4P11370 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.76■□□□□ 0.75
Fv4P11370 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fv4P11370 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fv4P11370 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.76■□□□□ 0.75
Fv4P11370 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.76■□□□□ 0.75
Fv4P11370 Gm10399-202ENSMUST00000202768 748 ntBASIC19.76■□□□□ 0.75
Fv4P11370 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
Fv4P11370 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fv4P11370 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fv4P11370 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Fv4P11370 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Fv4P11370 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Fv4P11370 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.75■□□□□ 0.75
Fv4P11370 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Fv4P11370 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fv4P11370 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fv4P11370 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fv4P11370 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Fv4P11370 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Fv4P11370 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.74■□□□□ 0.75
Fv4P11370 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Fv4P11370 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.74■□□□□ 0.75
Fv4P11370 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fv4P11370 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fv4P11370 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fv4P11370 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fv4P11370 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fv4P11370 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fv4P11370 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Fv4P11370 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fv4P11370 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fv4P11370 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fv4P11370 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Fv4P11370 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fv4P11370 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.72■□□□□ 0.75
Fv4P11370 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.72■□□□□ 0.75
Fv4P11370 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fv4P11370 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fv4P11370 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fv4P11370 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.71■□□□□ 0.75
Fv4P11370 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fv4P11370 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fv4P11370 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.71■□□□□ 0.75
Fv4P11370 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fv4P11370 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Fv4P11370 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fv4P11370 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.71■□□□□ 0.75
Fv4P11370 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms