Protein–RNA interactions for Protein: P0C2J7

TY4B-H, Transposon Ty4-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4B-HP0C2J7 YML116W-AYML116W-A 303 nt5.55□□□□□ -1.52
TY4B-HP0C2J7 YHR182WYHR182W 2358 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 FLO8YER109C 2400 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 tQ(UUG)CtQ(UUG)C 72 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 tQ(UUG)D1tQ(UUG)D1 72 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 tQ(UUG)D2tQ(UUG)D2 72 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 tQ(UUG)D3tQ(UUG)D3 72 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 tQ(UUG)E1tQ(UUG)E1 72 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 tQ(UUG)HtQ(UUG)H 72 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 tQ(UUG)LtQ(UUG)L 72 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 YLR407WYLR407W 687 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 SSL1YLR005W 1386 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 YTA12YMR089C 2478 nt5.54□□□□□ -1.52
TY4B-HP0C2J7 OCA4YCR095C 1089 nt5.53□□□□□ -1.52
TY4B-HP0C2J7 CAF16YFL028C 870 nt5.53□□□□□ -1.52
TY4B-HP0C2J7 FUR1YHR128W 651 nt5.53□□□□□ -1.52
TY4B-HP0C2J7 MCM1YMR043W 861 nt5.53□□□□□ -1.52
TY4B-HP0C2J7 AUA1YFL010W-A 285 nt5.53□□□□□ -1.52
TY4B-HP0C2J7 CDC12YHR107C 1224 nt5.53□□□□□ -1.52
TY4B-HP0C2J7 GLC3YEL011W 2115 nt5.52□□□□□ -1.53
TY4B-HP0C2J7 RPS14AYCR031C 414 nt5.52□□□□□ -1.53
TY4B-HP0C2J7 YDR282CYDR282C 1245 nt5.52□□□□□ -1.53
TY4B-HP0C2J7 VPS68YOL129W 555 nt5.51□□□□□ -1.53
TY4B-HP0C2J7 EFB1YAL003W 621 nt5.51□□□□□ -1.53
TY4B-HP0C2J7 LOH1YJL038C 660 nt5.51□□□□□ -1.53
TY4B-HP0C2J7 FBP1YLR377C 1047 nt5.51□□□□□ -1.53
TY4B-HP0C2J7 YDR545C-AYDR545C-A 480 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YEL077W-AYEL077W-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YER187WYER187W 426 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YER190C-BYER190C-B 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YFL068WYFL068W 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YGR296C-BYGR296C-B 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YHL050W-AYHL050W-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YHR219C-AYHR219C-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YIL177W-AYIL177W-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YJL225W-AYJL225W-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YLL066W-AYLL066W-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YLL067W-AYLL067W-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YLR466C-AYLR466C-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YLR467C-AYLR467C-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YML133W-BYML133W-B 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YNL339W-BYNL339W-B 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YBL113W-AYBL113W-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 BUB3YOR026W 1026 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YOR396C-AYOR396C-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YPL283W-BYPL283W-B 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 YPR204C-AYPR204C-A 483 nt5.5□□□□□ -1.53
TY4B-HP0C2J7 NMT1YLR195C 1368 nt5.49□□□□□ -1.53
TY4B-HP0C2J7 YDR246W-AYDR246W-A 201 nt5.49□□□□□ -1.53
TY4B-HP0C2J7 TAF5YBR198C 2397 nt5.49□□□□□ -1.53
TY4B-HP0C2J7 YIL001WYIL001W 1542 nt5.49□□□□□ -1.53
TY4B-HP0C2J7 PHO87YCR037C 2772 nt5.49□□□□□ -1.53
TY4B-HP0C2J7 SPC105YGL093W 2754 nt5.49□□□□□ -1.53
TY4B-HP0C2J7 YDR161WYDR161W 1164 nt5.48□□□□□ -1.53
TY4B-HP0C2J7 YGL072CYGL072C 360 nt5.48□□□□□ -1.53
TY4B-HP0C2J7 CWC2YDL209C 1020 nt5.48□□□□□ -1.53
TY4B-HP0C2J7 YHR173CYHR173C 339 nt5.48□□□□□ -1.53
TY4B-HP0C2J7 RPB7YDR404C 516 nt5.47□□□□□ -1.53
TY4B-HP0C2J7 HIS4YCL030C 2400 nt5.47□□□□□ -1.53
TY4B-HP0C2J7 COX4YGL187C 468 nt5.46□□□□□ -1.53
TY4B-HP0C2J7 YEL020CYEL020C 1683 nt5.46□□□□□ -1.54
TY4B-HP0C2J7 KIN4YOR233W 2403 nt5.46□□□□□ -1.54
TY4B-HP0C2J7 MRS2YOR334W 1413 nt5.46□□□□□ -1.54
TY4B-HP0C2J7 OTU1YFL044C 906 nt5.46□□□□□ -1.54
TY4B-HP0C2J7 UBX2YML013W 1755 nt5.45□□□□□ -1.54
TY4B-HP0C2J7 HAP1YLR256W 4509 nt5.45□□□□□ -1.54
TY4B-HP0C2J7 LTV1YKL143W 1392 nt5.45□□□□□ -1.54
TY4B-HP0C2J7 YKL023WYKL023W 834 nt5.45□□□□□ -1.54
TY4B-HP0C2J7 PER33YLR064W 822 nt5.45□□□□□ -1.54
TY4B-HP0C2J7 YER158CYER158C 1722 nt5.45□□□□□ -1.54
TY4B-HP0C2J7 RNR3YIL066C 2610 nt5.45□□□□□ -1.54
TY4B-HP0C2J7 FKH2YNL068C 2589 nt5.44□□□□□ -1.54
TY4B-HP0C2J7 NAT2YGR147C 867 nt5.44□□□□□ -1.54
TY4B-HP0C2J7 YHR032C-AYHR032C-A 120 nt5.44□□□□□ -1.54
TY4B-HP0C2J7 SLX1YBR228W 915 nt5.44□□□□□ -1.54
TY4B-HP0C2J7 ERG20YJL167W 1059 nt5.44□□□□□ -1.54
TY4B-HP0C2J7 YEN1YER041W 2280 nt5.43□□□□□ -1.54
TY4B-HP0C2J7 PAL1YDR348C 1500 nt5.43□□□□□ -1.54
TY4B-HP0C2J7 YAL047W-AYAL047W-A 330 nt5.43□□□□□ -1.54
TY4B-HP0C2J7 HMX1YLR205C 954 nt5.43□□□□□ -1.54
TY4B-HP0C2J7 HSP104YLL026W 2727 nt5.42□□□□□ -1.54
TY4B-HP0C2J7 YJL206CYJL206C 2277 nt5.42□□□□□ -1.54
TY4B-HP0C2J7 YNL194CYNL194C 906 nt5.42□□□□□ -1.54
TY4B-HP0C2J7 CWC25YNL245C 540 nt5.42□□□□□ -1.54
TY4B-HP0C2J7 ALT2YDR111C 1524 nt5.42□□□□□ -1.54
TY4B-HP0C2J7 RPL12AYEL054C 498 nt5.41□□□□□ -1.54
TY4B-HP0C2J7 MSK1YNL073W 1731 nt5.41□□□□□ -1.54
TY4B-HP0C2J7 MNT2YGL257C 1677 nt5.41□□□□□ -1.54
TY4B-HP0C2J7 YLR296WYLR296W 327 nt5.4□□□□□ -1.54
TY4B-HP0C2J7 RPL18BYNL301C 561 nt5.4□□□□□ -1.54
TY4B-HP0C2J7 IMA3YIL172C 1770 nt5.4□□□□□ -1.55
TY4B-HP0C2J7 IMA4YJL221C 1770 nt5.4□□□□□ -1.55
TY4B-HP0C2J7 CYM1YDR430C 2970 nt5.4□□□□□ -1.55
TY4B-HP0C2J7 YIL021C-AYIL021C-A 270 nt5.39□□□□□ -1.55
TY4B-HP0C2J7 EAR1YMR171C 1653 nt5.39□□□□□ -1.55
TY4B-HP0C2J7 ENP1YBR247C 1452 nt5.39□□□□□ -1.55
TY4B-HP0C2J7 BUD17YNR027W 954 nt5.39□□□□□ -1.55
TY4B-HP0C2J7 SEC39YLR440C 2130 nt5.38□□□□□ -1.55
TY4B-HP0C2J7 SEC72YLR292C 582 nt5.38□□□□□ -1.55
TY4B-HP0C2J7 RFA2YNL312W 822 nt5.38□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 118 ms