Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rc3h2P0C090 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.83■□□□□ 0.92
Rc3h2P0C090 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rc3h2P0C090 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Rc3h2P0C090 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h2P0C090 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h2P0C090 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.82■□□□□ 0.92
Rc3h2P0C090 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rc3h2P0C090 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h2P0C090 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.82■□□□□ 0.92
Rc3h2P0C090 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rc3h2P0C090 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rc3h2P0C090 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.8■□□□□ 0.92
Rc3h2P0C090 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.8■□□□□ 0.92
Rc3h2P0C090 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.8■□□□□ 0.92
Rc3h2P0C090 Gm8493-201ENSMUST00000196881 489 ntBASIC20.8■□□□□ 0.92
Rc3h2P0C090 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.8■□□□□ 0.92
Rc3h2P0C090 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h2P0C090 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rc3h2P0C090 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h2P0C090 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rc3h2P0C090 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.79■□□□□ 0.92
Rc3h2P0C090 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rc3h2P0C090 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rc3h2P0C090 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Gm43017-201ENSMUST00000198296 752 ntBASIC20.77■□□□□ 0.92
Rc3h2P0C090 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rc3h2P0C090 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rc3h2P0C090 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h2P0C090 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h2P0C090 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rc3h2P0C090 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.76■□□□□ 0.91
Rc3h2P0C090 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
Rc3h2P0C090 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Rc3h2P0C090 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h2P0C090 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h2P0C090 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
Rc3h2P0C090 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h2P0C090 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
Rc3h2P0C090 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h2P0C090 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rc3h2P0C090 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rc3h2P0C090 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h2P0C090 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h2P0C090 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h2P0C090 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h2P0C090 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.73■□□□□ 0.91
Rc3h2P0C090 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rc3h2P0C090 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms