Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sod1P08228 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sod1P08228 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sod1P08228 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sod1P08228 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sod1P08228 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sod1P08228 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sod1P08228 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.5■□□□□ 0.71
Sod1P08228 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sod1P08228 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.5■□□□□ 0.71
Sod1P08228 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sod1P08228 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sod1P08228 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sod1P08228 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sod1P08228 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.49■□□□□ 0.71
Sod1P08228 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.49■□□□□ 0.71
Sod1P08228 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sod1P08228 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sod1P08228 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sod1P08228 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.49■□□□□ 0.71
Sod1P08228 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sod1P08228 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sod1P08228 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sod1P08228 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sod1P08228 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sod1P08228 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sod1P08228 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sod1P08228 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sod1P08228 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sod1P08228 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sod1P08228 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.47■□□□□ 0.71
Sod1P08228 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sod1P08228 Gm10493-201ENSMUST00000097270 612 ntBASIC19.47■□□□□ 0.71
Sod1P08228 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.47■□□□□ 0.71
Sod1P08228 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.47■□□□□ 0.71
Sod1P08228 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sod1P08228 Smad6-203ENSMUST00000179458 273 ntBASIC19.46■□□□□ 0.71
Sod1P08228 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.46■□□□□ 0.71
Sod1P08228 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sod1P08228 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sod1P08228 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Sod1P08228 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sod1P08228 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sod1P08228 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sod1P08228 Gm40848-201ENSMUST00000221998 324 ntBASIC19.45■□□□□ 0.7
Sod1P08228 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sod1P08228 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sod1P08228 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sod1P08228 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sod1P08228 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Sod1P08228 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sod1P08228 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sod1P08228 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sod1P08228 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sod1P08228 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.44■□□□□ 0.7
Sod1P08228 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sod1P08228 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.43■□□□□ 0.7
Sod1P08228 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.43■□□□□ 0.7
Sod1P08228 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.43■□□□□ 0.7
Sod1P08228 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.43■□□□□ 0.7
Sod1P08228 Gm26571-201ENSMUST00000181399 666 ntBASIC19.43■□□□□ 0.7
Sod1P08228 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.43■□□□□ 0.7
Sod1P08228 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sod1P08228 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sod1P08228 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sod1P08228 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.42■□□□□ 0.7
Sod1P08228 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Sod1P08228 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sod1P08228 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sod1P08228 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sod1P08228 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Sod1P08228 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sod1P08228 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.41■□□□□ 0.7
Sod1P08228 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sod1P08228 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.41■□□□□ 0.7
Sod1P08228 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.41■□□□□ 0.7
Sod1P08228 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sod1P08228 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sod1P08228 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Sod1P08228 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.41■□□□□ 0.7
Sod1P08228 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sod1P08228 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sod1P08228 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sod1P08228 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sod1P08228 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sod1P08228 Gm29257-201ENSMUST00000186115 639 ntBASIC19.4■□□□□ 0.7
Sod1P08228 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sod1P08228 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sod1P08228 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sod1P08228 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sod1P08228 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms