Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PdgfrbP05622 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfrbP05622 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PdgfrbP05622 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfrbP05622 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PdgfrbP05622 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfrbP05622 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PdgfrbP05622 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.64■□□□□ 0.89
PdgfrbP05622 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.64■□□□□ 0.89
PdgfrbP05622 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PdgfrbP05622 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PdgfrbP05622 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfrbP05622 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfrbP05622 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfrbP05622 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfrbP05622 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfrbP05622 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfrbP05622 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfrbP05622 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PdgfrbP05622 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfrbP05622 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfrbP05622 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfrbP05622 Gm14117-201ENSMUST00000122417 843 ntBASIC20.61■□□□□ 0.89
PdgfrbP05622 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfrbP05622 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfrbP05622 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfrbP05622 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfrbP05622 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfrbP05622 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.6■□□□□ 0.89
PdgfrbP05622 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.6■□□□□ 0.89
PdgfrbP05622 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.6■□□□□ 0.89
PdgfrbP05622 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfrbP05622 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfrbP05622 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfrbP05622 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfrbP05622 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfrbP05622 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfrbP05622 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfrbP05622 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.59■□□□□ 0.89
PdgfrbP05622 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfrbP05622 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfrbP05622 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.59■□□□□ 0.89
PdgfrbP05622 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfrbP05622 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfrbP05622 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PdgfrbP05622 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfrbP05622 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfrbP05622 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfrbP05622 Rps24-207ENSMUST00000224568 714 ntBASIC20.58■□□□□ 0.89
PdgfrbP05622 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfrbP05622 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PdgfrbP05622 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfrbP05622 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.58■□□□□ 0.88
PdgfrbP05622 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PdgfrbP05622 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PdgfrbP05622 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PdgfrbP05622 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfrbP05622 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfrbP05622 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfrbP05622 Gm45102-201ENSMUST00000207427 857 ntBASIC20.57■□□□□ 0.88
PdgfrbP05622 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfrbP05622 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PdgfrbP05622 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PdgfrbP05622 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.56■□□□□ 0.88
PdgfrbP05622 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.56■□□□□ 0.88
PdgfrbP05622 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PdgfrbP05622 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfrbP05622 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.55■□□□□ 0.88
PdgfrbP05622 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfrbP05622 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms